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Performance trap: general libraries & helper objects
David Haley
David Haley
David Haley
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Oct 9
Performance trap: general libraries & helper objects
#
performance
#
software
#
python
#
bioinformatics
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3 min read
Optimizing QuPath intensity measurements: 12.5 hr to 2min
David Haley
David Haley
David Haley
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Aug 31
Optimizing QuPath intensity measurements: 12.5 hr to 2min
#
performance
#
bioinformatics
#
kotlin
#
architecture
1
 reaction
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3 min read
Running DeepCell on Google Batch with node pools
David Haley
David Haley
David Haley
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Jun 15
Running DeepCell on Google Batch with node pools
#
googlecloud
#
serverless
#
bioinformatics
#
scale
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1 min read
Exploring the Cutting-Edge of Genome Hacking with Bioinformatics!
Jitendra Narayan
Jitendra Narayan
Jitendra Narayan
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Jun 5
Exploring the Cutting-Edge of Genome Hacking with Bioinformatics!
#
bioinformatics
#
genomes
#
hacking
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1 min read
Download Fasta files in Bash using Nano text editor in 4 simple steps
Obioma Chukueggu
Obioma Chukueggu
Obioma Chukueggu
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Mar 19
Download Fasta files in Bash using Nano text editor in 4 simple steps
#
nanognu
#
bash
#
bioinformatics
2
 reactions
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2
 comments
1 min read
Faster tetranucleotide (k-mer) frequencies!
Boyd Duffee
Boyd Duffee
Boyd Duffee
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Mar 15
Faster tetranucleotide (k-mer) frequencies!
#
perl
#
bioinformatics
#
profiling
#
softwaredevelopment
1
 reaction
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8 min read
Bioinformatics: PackagesNotFoundError on osx-arm64 Platform
Awosise Oluwaseun
Awosise Oluwaseun
Awosise Oluwaseun
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Apr 9
Bioinformatics: PackagesNotFoundError on osx-arm64 Platform
#
bioinformatics
#
cli
#
beginners
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2 min read
Announcing WDL 1.1.1
John Didion
John Didion
John Didion
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OpenWDL
Dec 6 '23
Announcing WDL 1.1.1
#
wdl
#
bioinformatics
#
workflows
2
 reactions
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5 min read
What is Bioconductor in R ?
MennahTullah Mabrouk
MennahTullah Mabrouk
MennahTullah Mabrouk
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Jun 18 '23
What is Bioconductor in R ?
#
bioinformatics
#
computationalbiology
#
bioconductor
#
r
5
 reactions
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4 min read
Solution-diffusion model in Rust
Attila Molnar
Attila Molnar
Attila Molnar
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May 14 '23
Solution-diffusion model in Rust
#
rust
#
simulation
#
biology
#
bioinformatics
5
 reactions
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5 min read
Tips for scalable workflows on AWS
W. Lee Pang, PhD
W. Lee Pang, PhD
W. Lee Pang, PhD
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Jul 1 '22
Tips for scalable workflows on AWS
#
aws
#
bioinformatics
9
 reactions
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8 min read
Why I'm hyped about Julia for Bioinformatics
Edmund Miller
Edmund Miller
Edmund Miller
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Jun 1 '22
Why I'm hyped about Julia for Bioinformatics
#
bioinformatics
2
 reactions
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4 min read
Introducing myself
W. Lee Pang, PhD
W. Lee Pang, PhD
W. Lee Pang, PhD
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Apr 26 '22
Introducing myself
#
aws
#
bioinformatics
6
 reactions
Comments
2
 comments
2 min read
Profiling workflows with the Amazon Genomics CLI
W. Lee Pang, PhD
W. Lee Pang, PhD
W. Lee Pang, PhD
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Apr 26 '22
Profiling workflows with the Amazon Genomics CLI
#
aws
#
bioinformatics
#
genomics
7
 reactions
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17 min read
How to install Gromacs, PyMOL, AutoDock Vina, VMD, MGLTools, Avogadro2, Open Babel in Ubuntu 20.04
Abdullah Al Nahid
Abdullah Al Nahid
Abdullah Al Nahid
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Oct 31 '21
How to install Gromacs, PyMOL, AutoDock Vina, VMD, MGLTools, Avogadro2, Open Babel in Ubuntu 20.04
#
linux
#
bash
#
bioinformatics
36
 reactions
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2 min read
Bash Commands for Bioinformatics Beginners: Part 1
Abdullah Al Nahid
Abdullah Al Nahid
Abdullah Al Nahid
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Sep 26 '20
Bash Commands for Bioinformatics Beginners: Part 1
#
bioinformatics
#
bash
#
linux
9
 reactions
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2 min read
[pt-BR] Minha jornada de aprendizagem em Python
Pâmella Araújo Balcaçar 🇧🇷
Pâmella Araújo Balcaçar 🇧🇷
Pâmella Araújo Balcaçar 🇧🇷
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Jul 21 '20
[pt-BR] Minha jornada de aprendizagem em Python
#
welcome
#
braziliandevs
#
python
#
bioinformatics
8
 reactions
Comments
2
 comments
2 min read
Slideio - an open-source python library for reading of medical images
Booritas
Booritas
Booritas
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Jul 5 '20
Slideio - an open-source python library for reading of medical images
#
bioinformatics
#
python
#
computervision
#
imageanalysis
4
 reactions
Comments
2
 comments
1 min read
Phred quality score
Roberto Preste
Roberto Preste
Roberto Preste
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Jul 7 '19
Phred quality score
#
python
#
analysis
#
bioinformatics
8
 reactions
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2 min read
Counting sequences in Fasta/Fastq files
Roberto Preste
Roberto Preste
Roberto Preste
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Jul 5 '19
Counting sequences in Fasta/Fastq files
#
bioinformatics
#
shell
#
linux
#
bash
11
 reactions
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2 min read
99 problems but Python ain't one!
Joana Chavez
Joana Chavez
Joana Chavez
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Aug 22 '18
99 problems but Python ain't one!
#
bioinformatics
#
python
#
datascience
#
compilation
72
 reactions
Comments
19
 comments
4 min read
Multiple Sequence alignment (MSA) [C++]
Mark vd Sman
Mark vd Sman
Mark vd Sman
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Dec 18 '19
Multiple Sequence alignment (MSA) [C++]
#
c
#
bioinformatics
6
 reactions
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17 min read
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