Part 1-3: From Raw Health Text to a Working Retrieval Pipeline

Bedirhan Kızılcık — Thu, 23 Jul 2026 17:29:36 +0000

I'm a first-year undergraduate student in Artificial Intelligence Engineering, and this summer I'm building a small RAG (Retrieval-Augmented Generation) project from scratch to learn how these systems actually work under the hood — not just by calling an API, but by building the pipeline piece by piece. This is a log of the first three parts of that journey.

Part 1: Understanding the Building Blocks

Before writing any real project code, I spent time understanding the core ideas behind RAG:

Calling an LLM API: sending a prompt programmatically and getting a response back. I used the Gemini API for this. llm_test.py
Embeddings: the idea that text can be converted into numerical vectors, where semantically similar sentences end up close to each other in vector space. I tested this with a handful of sentences using sentence-transformers and computed cosine similarity between them — it was satisfying to see related sentences actually cluster together numerically. embedding_test.py
Why not just dump everything into the LLM?: context windows are limited, it's expensive, and irrelevant information can actually hurt answer quality rather than help it.
Vector databases: conceptually, tools like Chroma or FAISS solve the problem of searching through large numbers of embeddings quickly to find the most relevant ones. No heavy coding in Part 1 — mostly small test scripts to confirm I understood each piece before combining them.

Part 2: Collecting and Preparing Real Data

With the concepts in place, Part 2 was about getting real data ready for retrieval:

Data collection: I gathered short health topic descriptions (e.g. diabetes, epilepsy) and saved them as structured JSON records, each with a source and text field. Keeping the source attached to each record matters — it means the system can eventually point back to where an answer came from. data/health_data.json
Chunking: I wrote a script to split each record's text into smaller, paragraph-level pieces while keeping the original source attached to every chunk. Since I intentionally kept the raw text short for this first test run, most entries ended up as a single chunk each — which is fine for now, since the goal was to validate the pipeline, not build a large dataset yet.
Why chunk at all?: embedding models represent short, focused pieces of text more accurately than long documents. Splitting text into meaningful chunks is what makes retrieval actually useful later.

Part 3: Setting Up the Vector Store and First Retrieval

With chunked, source-tagged data ready, Part 3 turned that data into something actually searchable:

Vector store setup: installed and configured Chroma, then embedded every chunk from Part 2 and stored it alongside its text and source metadata. embed_and_store.py
First retrieval test: wrote a query script, asked a sample question, and retrieved the most similar chunks from the vector store. The results were reasonable given how small and short the dataset still is — a good early sign that the pipeline itself works end to end. retrieval_test.py
A note on limitations: since the dataset is intentionally tiny at this stage, retrieval quality is limited. That's expected, and it'll improve as the dataset grows in later parts.

What's Next

At this point I have a full (if small-scale) pipeline: raw text → structured data → chunks → embeddings → retrieval. The next step is connecting retrieval to actual answer generation — feeding retrieved chunks into the LLM as context so it can answer health questions grounded in real source material.

👉 Code for this project: health-rag-assistant

Follow along as I build this project part by part — code on GitHub, progress here on Dev.to.

DEV Community: Bedirhan Kızılcık

Part 1-3: From Raw Health Text to a Working Retrieval Pipeline

Part 1: Understanding the Building Blocks

Part 2: Collecting and Preparing Real Data

Part 3: Setting Up the Vector Store and First Retrieval

What's Next