DEV Community: Eliyahou

Add CI to our new Project

Eliyahou — Sun, 18 Jun 2023 20:14:40 +0000

create test file in order to use pytest
create yaml file that runs the pytest with the requierments neccesary
In order to check validity of the gembank file of the project that contains Genom of Bacillus subtilis bacterium.
In my tests I checked that the gb file include the features of CDS and GENE.
Without this features the file is not valid
The checks that I did was on the original gb file and got success

I did another check with none valid file and the test failed

I sent 2 PR to my partner:

Computational biology

Session 11: Testing with PyTest

Eliyahou — Tue, 13 Jun 2023 12:29:06 +0000

pytest: helps you write better programs
The pytest framework makes it easy to write small, readable tests, and can scale to support complex functional testing for applications and libraries.

This code defines a simple test case using the pytest framework.
• The inc function takes a number x and returns x + 1.
• The test_answer function asserts that calling inc(3) should return 5.
• When this test is run using pytest, it will pass if the assertion is true and fail if the assertion is false.
• This is a simple example of how to use pytest to write and run tests for your code.

Ex5 : Track projects & Fix PR

Eliyahou — Sun, 11 Jun 2023 08:42:51 +0000

Add better projects to your JSON :

Our final project is about Smart Contract Vulnerabilities
Accordingly we are following this projects:

IRAILS
A mvc framework used FastApi Simple and elegant use of FastApi in MVC mode
Smart-Contract-Dataset
This dataset consists of over 40K real world Ethereum smart contracts.
Secureum
GNNSCVulDetector
This repo is a python implementation of smart contract vulnerability detection using graph neural networks
smart-contract-vulnerabilities

This project VCS was incorrect on pydigger:
_elkaudio _project the url was : elkaudio on pydigger the proper url is: https://github.com/elk-audio/elkpy
I have send PR to fix it

CI - Countinous Integration

Eliyahou — Mon, 29 May 2023 16:11:22 +0000

In the lesson we have learned how to create actions in file .github/workflows
The porpos is that when we push PR into github We want to have some checks on it
We have learned about local environment that we can use in the action and about Matrix that uses Dynamic variables we also saw an exaples of the action in run time
It is done by creating a YAML with some action in it
An example of YAML file:

name: Python

on: push

jobs:
  build:
    runs-on: ubuntu-latest

    steps:
    - uses: actions/checkout@v3

    - name: Setup Python
      uses: actions/setup-python@v2

    - name: Install dependencies
      run: pip install -r requirements.txt

    - name: Check Python version
      run: python -V

    - name: Test with pytest
      run: pytest

I created CI for project name xpath-filter
The PR for Adding the CI

git-scm on Windows, GitHub contribution workflow

Eliyahou — Mon, 08 May 2023 12:34:41 +0000

How to add/edit files to GitHub from my Windows environment:
first - download notepad
second - download git-scm
//Do not forget to choose Notepad as the default editing program

I have added an organization as yaml file to
open-source-by-organizations site by the following instructions:

$ git clone https://github.com/OSDC-Code-Maven/open-source-by-organizations.git //
Cloning into 'open-source-by-organizations'
$ cd open-source-by-organizations/)
$ cat .git/config
$ git checkout -b organizations/add
Switched to a new branch 'organizations/add'
$ git status
On branch organizations/add
nothing to commit, working tree clean
$ cd data/organisations/
$ notepad jce.yaml
$ git remote -v
origin https://github.com/OSDC-Code-Maven/open-source-by-organizations.git
(fetch)
origin https://github.com/OSDC-Code-Maven/open-source-by-organizations.git
(push)
$ git push --set-upstream fork organizations/add
$ git add jce.yaml
$ git commit -m "add jce organization"
[organizations/add 0737ede] add jce organization
1 file changed, 5 insertions(+)
create mode 100644 data/organisations/jce.yaml
$ git rebase main
$ git push --force

Docker & images

Eliyahou — Tue, 02 May 2023 20:55:09 +0000

In the lesson we learned about building new enviroement that has an image that serves the project we want to run.
That is Docker.
we can clone any project to our computer.
the advantages of using the Docker is that we can run it seperately from other services that runs on our computer.
In that way we are sort of safe running the project, beacause we use permission to control on what the new project can tuch.
It is very easy to delete the new project without harming any other service that runs on our computer.
installetion:

I have installed docker Desktop
clone the "omicscope" on cmd
run the project
omicscope
PR omicscope
PR slides
PR to Plagiarism-checker-Python
PR slides

4 : Follows github project and fixing Lacks

Eliyahou — Sun, 16 Apr 2023 10:39:40 +0000

send PR to add MetaData to projects:

Remaster Alex Pauwels https://github.com/remastr/django-unfold/pull/61\

-
tee-ar-ex
trx-python
Francois Rheault
@FrancoisRheault
https://github.com/tee-ar-ex/trx-python/pull/58

-
Corran Webster

https://github.com/celiagg/celiagg/pull/121

iterative/dvc-render
Dave Berenbaum
dave.berenbaum@gmail.com
https://github.com/iterative/dvc-render/pull/128

Add projects to follow:

Session 3 Create Github Site

Eliyahou — Tue, 28 Mar 2023 20:00:20 +0000

The Topics Of the Lesson are:

Back to local linux PC
Create repository for Github pages site (on Github)
Clone for create repository localy (on PC)
Download and install the git client from git-scm
In Windows, git-bash application
Setup local git configure (add, commit, config, etc.)
Create private/public key pair
Push changes (git push)
Congif github.io repository (on Github-settings)
Creating the Github page using Markdown
Push more changes (git status, add, commit, log. etc.)
The Github page after changes
Adding images to our Github page (add another file)
Push images and more changes (git status, add, commit, etc.)
Jekyll (from Markdown to Github)

mysite

OSDC-2023-second-assignment

Eliyahou — Tue, 21 Mar 2023 13:45:27 +0000

The issues I have learned In The Second Lesson are:

Dev.to - navigation using tags
Opening issues in git
Issues and pull requests
Sample for real project interaction for Forem
Git project concepts, Forking and comminting
Locking files - pros and cons
Following a project and notifications in Git
Ranking mechanizm of projects
Sturcture of Git URLs, projects/ organizations/ repos
3rd party packages registry
Open source by orgznizations
YAML file format

Adding new organizations using YAML

Examples

Eliyahou Levi Post

Eliyahou — Tue, 14 Mar 2023 19:31:04 +0000

Editor Basics
Use Markdown to write and format posts.
Commonly used syntax
Embed rich content such as Tweets, YouTube videos, etc.ported embeds.
In addition to images for the post's content, you can also drag and drop a cover image.