Fix Cert-Manager Conflict with EKS

I was facing issue with multiple managed worker nodes running on EKS clusters.

The issue was appearing randomly in different nodes, I cannot access the pods or get the logs by kubectl.

x509: cannot validate certificate for 10.0.83.153 because it doesn’t contain any IP SANs 

Kube API in the CloudWatch showing the following errors:

E0327 08:54:17.406029 11 status.go:71] apiserver received an error that is not an metav1.Status: &errors.errorString{s:"error dialing backend: x509: cannot validate certificate for 10.0.83.153 because it doesn't contain any IP SANs"}: error dialing backend: x509: cannot validate certificate for 10.0.83.153 because it doesn't contain any IP SANs 

After investigating the issue with the AWS EKS support team, we found that cert-manager-webhook is causing the issue.
Kubelet certificate chain is being used from cert-manager-webhook-ca.

Run the following command on the non-working node:

openssl s_client -connect localhost:10250 

CONNECTED(00000003)
---
Certificate chain
 0 s:
   i:/CN=cert-manager-webhook-ca
---
Server certificate
-----BEGIN CERTIFICATE-----
-----END CERTIFICATE-----
subject=
issuer=/CN=cert-manager-webhook-ca
---

Run the following command on the working healthy node:

openssl s_client -connect localhost:10250 

CONNECTED(00000003)
---
Certificate chain
 0 s:/O=system:nodes/CN=system:node:ip-10-0-31-151.eu-west-1.compute.internal
   i:/CN=kubernetes
---
Server certificate
-----BEGIN CERTIFICATE-----
-----END CERTIFICATE-----
subject=/O=system:nodes/CN=system:node:ip-10-0-31-151.eu-west-1.compute.internal
issuer=/CN=kubernetes
---

The cert-manager-webhook deployment uses port 10250 which is also used for kubelet.

The solution is change the port of cert-manager-webhook to 10260.

By setting webhook.securePort to 10260

helm install \
  cert-manager jetstack/cert-manager \
  --namespace cert-manager \
  --create-namespace \
  --version v1.10.0 \
  --set webhook.securePort=10260

Sources:

https://cert-manager.io/docs/concepts/webhook/
https://cert-manager.io/docs/installation/compatibility/#aws-eks