Nadia Baig

Genome-wide-SNP-discovery-using-RAD-seq-data

A bash script based pipeline to analyze Rad-seq data to get SNPs.

Shell • 1 star

Protein_BLAST_Visualization

A python toolkit that turns NCBI BLASTP results into publication ready plots and summary tables. It is designed for BLAST results saved in tabular format

Python

Solanum_Hugassi_Nuc_search

Short scripts for fetching nucleotide (FASTA), SRA (fastq), protein/gene information and Publication records from NCBI database for Solanum_Hugassii. Scripts can be modified to extract information for other species too.

Python

Short_scripts_NGS_data_processing

This repository consists of short python/bash scripts that you need at some point of your NGS data processing and analysis.

Python • 4 stars